Goal

Improve the nf-core/seqinspector pipeline with bug fixes, performance enhancements, and documentation updates.

Tasks

Possible tasks may be as follows:

  • review and optimize tool bundles (make sure they make sense!)
  • optimize MultiQC outputs (order, what is displayed etc)
  • write a module for ONT/Element Biosciences runfolder parsing
  • add support for (u)BAM file input (PacBio/ONT)
  • improve and update the metro map (we will at some point need a way to have a metromap that will not display all possible tools and that is still useful!)

Please find the full list of issues on the nf-core/seqinspector project board (milestone 1.2.0).

Note

Keep an eye on this page for more updates.

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location
Barcelona
category
pipelines
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