nf-core/newsletter, October 2026
16 pipeline releases, 3 upcoming events.
View on the nf-core website
New pipeline first releases 🎉
These pipelines just had their very first release.
- nf-core/funcprofiler v1.0.0 — Read-based functional profiling of microbiome sequencing data
- nf-core/genomeqc v1.0.0, v1.0.1 — Compare the quality of multiple genomes, along with their annotations.
- nf-core/rnastructurome v1.0.0 — a bioinformatics pipeline for analysing chemical high-throughput RNA structure-probing data
- nf-core/stableexpression vv1.0.0, v1.0.0 — This pipeline is designed to identify the most stable genes in one or more expression datasets (RNA-seq / Microarray). The ideal use case is for determining the most suitable RT-qPCR reference genes for a given species.
In case you missed it
Recent events
Earlier blog posts
Earlier advisories
New pipelines & proposals
New pipeline repositories
- nf-core/captnseq (in development) — CAPTn-seq is an extended Tn-seq pipeline that goes 1) from raw reads to gene essentiality then 2) to gene-gene interaction calls (fron HTTM experiments).
Pipeline proposals
From nf-core/proposals.
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